updated project to latest cookiecutter

.flake8

@@ -0,0 +1,2 @@
+[flake8]
+per-file-ignores = tests/*:S101

.gitignore

@@ -1,12 +1,3 @@
-# current database, edited all the time
-ordr3.sqlite
-
-# production.ini and secrets
-production.ini
-
-# development mail folder
-mail/
-
 # ---> Python
 # Byte-compiled / optimized / DLL files
 __pycache__/

Makefile

@@ -57,23 +57,16 @@ lint: ## reformat with black and check style with flake8
 	flake8 ordr3 tests
 
 test: lint ## run tests quickly with the default Python
-	pytest tests -x --disable-warnings -m "not app"
+	pytest tests -x --disable-warnings -m "not fun"
-
-functest: lint ## run functional tests quickly with the default Python
-	pytest tests/functional -x --disable-warnings -m "not app"
 
+testall: lint ## run tests quickly with the default Python
+	pytest tests
 
 coverage: lint ## full test suite, check code coverage and open coverage report
-	pytest tests --cov=ordr3
+	pytest tests --cov=ordr3 -m "fun"
-	coverage html
-	$(BROWSER) htmlcov/index.html
-
-funcoverage: lint ## only functional test suite, check code coverage and open coverage report
-	pytest tests/functional --cov=ordr3
 	coverage html
 	$(BROWSER) htmlcov/index.html
 
-
 tox:  ## run fully isolated tests with tox
 	tox
 
@@ -83,12 +76,15 @@ install:  ## install updated project.toml with flint
 devenv: ## setup development environment
 	python3 -m venv --prompt ordr3 .venv
 	.venv/bin/pip3 install --upgrade pip
-	.venv/bin/pip3 install flit
+	.venv/bin/pip3 install "flit>3.2"
 	.venv/bin/flit install --pth-file
 
 repo: devenv ## complete project setup with development environment and git repo
 	git init .
+	git branch -m main
 	git add .
 	git commit -m "import of project template"
-
+	git remote add origin https://git.cpi.imtek.uni-freiburg.de/CPI/ordr3.git
+	git push -u origin main --no-verify
+	
 	.venv/bin/pre-commit install --install-hooks

pyproject.toml

@@ -4,14 +4,17 @@
 requires = ["flit"]
 build-backend = "flit.buildapi"
 
-[tool.flit.metadata]
+[project]
-module = "ordr3"
+name = "ordr3"
-dist-name = "ordr3"
+readme = "README.md"
-author = "Holger Frey"
+description = "Our custom ordering system"
-author-email = "frey@imtek.de"
+license = { file = "LICENSE" }
-home-page = "https://github.com/holgi/ordr3"
+requires-python = ">=3.7"
-description-file = "README.md"
+dynamic = ["version"]
-license = "Beerware"
+
+authors = [
+    {name = "Holger Frey", email = "frey@imtek.de"},
+]
 
 # see https://pypi.org/classifiers/
 classifiers = [
@@ -23,58 +26,58 @@ classifiers = [
     "License :: Freely Distributable",
 ]
 
-requires = [
+dependencies = [
-    "deform >= 2.0.8",
+    "deform",
-    "passlib[argon2,bcrypt] >= 1.7.2",
+    "passlib[argon2,bcrypt] >= 1.7",
-    "pyramid >= 1.10",
+    "pyramid >= 2.0",
-    "pyramid_debugtoolbar >= 4.6.1",
+    "pyramid_debugtoolbar",
-    "pyramid_jinja2 >= 2.7",
+    "pyramid_jinja2",
-    "pyramid_mailer >= 0.15.1",
+    "pyramid_mailer",
-    "pyramid_tm >= 2.4",
+    "pyramid_tm",
-    "pyramid_retry >= 2.1",
+    "pyramid_retry",
-    "requests >= 2.23.0",
+    "requests >= 2.23",
-    "sqlalchemy >= 1.3.15",
+    "sqlalchemy",
     "transaction >= 3.0.0",
-    "waitress >= 1.4.3",
+    "waitress",
-    "zope.sqlalchemy >= 1.3",
+    "zope.sqlalchemy",
 ]
-requires-python = ">=3.7"
 
-[tool.flit.metadata.requires-extra]
+[project.urls]
+Source = "https://git.cpi.imtek.uni-freiburg.de/CPI/ordr3.git"
+
+[project.entry-points."paste.app_factory"]
+main = "ordr3:main"
+
+[project.optional-dependencies]
 test = [
     "pytest >=4.0.0",
     "pytest-cov",
     "pytest-mock",
+    "pytest-randomly",
     "tox",
-    "WebTest >= 2.0.34",
 ]
 dev = [
     "black",
     "flake8",
     "flake8-comprehensions",
+    "flake8-bandit",
     "isort >= 5.0.0",
     "keyring",
     "pre-commit",
 ]
 
-[tool.flit.scripts]
-migrate = "ordr3.scripts.migrate_db:main"
-
-[tool.flit.entrypoints."paste.app_factory"]
-main = "ordr3:main"
-
 [tool.black]
 line-length = 79
-py37 = true
+target-version = ['py37','py38', 'py39']
 include = '\.pyi?$'
-exclude = '''
+extend-exclude = '''
-/(
+# A regex preceded with ^/ will apply only to files and directories
-    \.git
+# in the root of the project.
-  | \.tox
+^/.git
-  | \.venv
+^/.tox
-  | build
+^/.venv
-  | dist
+^/.build
-)/
+^/.dist
 '''
 
 [tool.isort]
@@ -82,3 +85,11 @@ line_length=79
 multi_line_output=3
 length_sort="True"
 include_trailing_comma="True"
+
+[tool.pytest.ini_options]
+markers = [
+    "fun: marks tests as functional (deselect with '-m \"not fun\"')",
+]
+addopts = [
+    "--strict-markers",
+]

requirements.txt

@@ -1,87 +0,0 @@
-appdirs==1.4.4
-argon2-cffi==20.1.0
-attrs==20.2.0
-bcrypt==3.2.0
-beautifulsoup4==4.9.3
-black==20.8b1
-certifi==2020.6.20
-cffi==1.14.3
-cfgv==3.2.0
-Chameleon==3.8.1
-chardet==3.0.4
-click==7.1.2
-colander==1.8.2
-coverage==5.3
-cryptography==3.1.1
-deform==2.0.14
-distlib==0.3.1
-docutils==0.16
-filelock==3.0.12
-flake8==3.8.4
-flake8-comprehensions==3.2.3
-flit==3.0.0
-flit-core==3.0.0
-hupper==1.10.2
-identify==1.5.5
-idna==2.10
-iniconfig==1.0.1
-iso8601==0.1.13
-isort==5.5.4
-jeepney==0.4.3
-Jinja2==2.11.2
-keyring==21.4.0
-Mako==1.1.3
-MarkupSafe==1.1.1
-mccabe==0.6.1
-mypy-extensions==0.4.3
-nodeenv==1.5.0
-packaging==20.4
-passlib==1.7.2
-PasteDeploy==2.1.0
-pathspec==0.8.0
-peppercorn==0.6
-plaster==1.0
-plaster-pastedeploy==0.7
-pluggy==0.13.1
-pre-commit==2.7.1
-py==1.9.0
-pycodestyle==2.6.0
-pycparser==2.20
-pyflakes==2.2.0
-Pygments==2.7.1
-pyparsing==2.4.7
-pyramid==1.10.4
-pyramid-debugtoolbar==4.6.1
-pyramid-jinja2==2.8
-pyramid-mailer==0.15.1
-pyramid-mako==1.1.0
-pyramid-retry==2.1.1
-pyramid-tm==2.4
-pytest==6.1.1
-pytest-cov==2.10.1
-pytest-mock==3.3.1
-pytoml==0.1.21
-PyYAML==5.3.1
-regex==2020.9.27
-repoze.lru==0.7
-repoze.sendmail==4.4.1
-requests==2.24.0
-SecretStorage==3.1.2
-six==1.15.0
-soupsieve==2.0.1
-SQLAlchemy==1.3.19
-toml==0.10.1
-tox==3.20.0
-transaction==3.0.0
-translationstring==1.4
-typed-ast==1.4.1
-typing-extensions==3.7.4.3
-urllib3==1.25.10
-venusian==3.0.0
-virtualenv==20.0.33
-waitress==1.4.4
-WebOb==1.8.6
-WebTest==2.0.35
-zope.deprecation==4.4.0
-zope.interface==5.1.2
-zope.sqlalchemy==1.3