contactangle/README.md

collecting data from measured contact angles

While measuring contact angles, for each drop three pictures are recorded for the static, advancing and the receeding contact angle.

Usually the file name of this pictures consists of four parts:

1. an identifier for the measurement
2. what type of angle was measured, e.g. RCA for receeding contact angle
3. the measured contact angle on the left side of the drop
4. the measured contact angle on the right side of the drop

So a typical file name looks quite cyptic like: 'PS1 RCA 12,5 15,6'

In adittion to cryptic file names with abbreviations, there is normally quite an amount of files: 5 measurements x 3 types = 15 files for one substrate or coating alone.

This script provides means to rename these files to a more verbose version and to collect the data into a text file that can be imported in excel.

Since the naming of the type of measurement and the contact angles themselves are somehow fixed, the 'user defined action' is renaming the identifier. To do such a rename, a function accepting the identifier as string and returning a verbose version as a string needs to be provided

An Example >>> import conactangle as ca >>> def verbose_id(identifier): ... if identifier.startswith('PS'): ... verbose_name = 'Polystyrol' ... else: ... verbose_name = 'Unknown Substrate' ... number = identifier[-1] ... return '{}, Measurement {}'.format(verbose_name, number) ... >>> ca.rename(verbose_id, path='/example/directory')

This will change the cryptic filename 'PS1 RCA 12,5 15,6.bmp' to 'Polystyrol, Measurement 1, receeding, L12,5 R15,6.bmp'

To not tinker with the original files, the 'renaming' is done on a copy of the orignal data. The results file is called 'results.txt' and is created in the same directory where the raw data resides.

This is actually a two step process: first the files are processed and the future result of the rename is printed to stdout. If no exception occurs, the renaming of the files is done in a second round.