diff --git a/mtor/filesort.py b/mtor/filesort.py
deleted file mode 100644
index 82741d9..0000000
--- a/mtor/filesort.py
+++ /dev/null
@@ -1,52 +0,0 @@
-import pathlib
-
-from tqdm import tqdm
-
-from .prescan import LABEL_SELECTED, LABEL_DISCARDED
-
-
-def stem_file_list(selected_files):
-    return {pathlib.Path(filename).stem for filename in selected_files}
-
-
-def rename_color_coded_images(file_stems, settings):
-    rename_pairs = []
-    for path in settings.colored_dir.iterdir():
-        if not path.stem.startswith("."):
-            label = (
-                LABEL_SELECTED if path.stem in file_stems else LABEL_DISCARDED
-            )
-            new_name = path.with_name(f"{path.stem}_{label}{path.suffix}")
-            rename_pairs.append((path, new_name))
-    return rename_pairs
-
-
-def sort_cut_images(file_stems, settings):
-    sort_pairs = []
-    for path in settings.cuts_dir.iterdir():
-        if not path.stem.startswith("."):
-            stem = path.stem[:-4]  # removes the "_cut" suffix
-            label = LABEL_SELECTED if stem in file_stems else LABEL_DISCARDED
-            new_path = (
-                settings[f"cuts_{label}_dir"]
-                / f"{path.stem}_{label}{path.suffix}"
-            )
-            sort_pairs.append((path, new_path))
-    return sort_pairs
-
-
-def remove_cuts_dir(settings):
-    for item in settings["cuts_dir"].iterdir():
-        item.unlink()
-    settings["cuts_dir"].rmdir()
-
-
-def filesort_workflow(selected_files, settings):
-    print("4/4: Sorting images")
-    file_stems = stem_file_list(selected_files)
-    cc_rename_pairs = rename_color_coded_images(file_stems, settings)
-    cut_sort_pairs = sort_cut_images(file_stems, settings)
-    file_pairs = cc_rename_pairs + cut_sort_pairs
-    for old_path, new_path in tqdm(file_pairs):
-        old_path.rename(new_path)
-    remove_cuts_dir(settings)
diff --git a/test_mtor.py b/test_mtor.py
index 459d471..cef63aa 100644
--- a/test_mtor.py
+++ b/test_mtor.py
@@ -5,5 +5,5 @@ tif_dir = "original_tifs"
 #mtor.process_tifs(tif_dir, 50, 910, 300, 660, boost=5)
 
 
-mtor.run()
-#mtor.run_data()
+#mtor.run()
+mtor.run_data()