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41 lines
980 B
41 lines
980 B
""" Sensospot Data Parser |
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Parsing the numerical output from Sensovations Sensospot image analysis. |
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""" |
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__version__ = "0.4.0" |
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from pathlib import Path |
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import click |
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from .utils import split_data_frame, apply_exposure_map # noqa: F401 |
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from .parser import parse_file, parse_folder # noqa: F401 |
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from .parameters import ExposureInfo, get_measurement_params # noqa: F401 |
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from .dynamic_range import blend, create_xdr, normalize_values # noqa: F401 |
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@click.command() |
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@click.argument( |
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"source", |
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type=click.Path( |
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exists=True, |
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file_okay=False, |
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dir_okay=True, |
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readable=True, |
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writable=True, |
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), |
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) |
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@click.option( |
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"-o", |
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"--outfile", |
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default="raw_data.h5", |
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help="Output file name", |
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) |
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def run(source, outfile): |
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source_path = Path(source) |
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# read the raw data of a folder |
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raw_data = parse_folder(source_path) |
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hdf5_path = source_path / outfile |
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raw_data.to_hdf(hdf5_path, key="raw_data", format="table")
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