Parsing the numerical output from Sensovation SensoSpot image analysis.
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""" Sensospot Data Parser
Parsing the numerical output from Sensovations Sensospot image analysis.
"""
__version__ = "0.5.2"
from pathlib import Path
import click
from .utils import ( # noqa: F401
aggregate,
add_aggregate,
split_data_frame,
apply_exposure_map,
)
from .parser import parse_file, parse_folder # noqa: F401
from .parameters import ExposureInfo # noqa: F401
from .dynamic_range import blend, create_xdr, normalize_values # noqa: F401
@click.command()
@click.argument(
"source",
type=click.Path(
exists=True,
file_okay=False,
dir_okay=True,
readable=True,
writable=True,
),
)
@click.option(
"-o",
"--outfile",
default="raw_data.h5",
help="Output file name",
)
def run(source, outfile):
source_path = Path(source)
# read the raw data of a folder
raw_data = parse_folder(source_path)
hdf5_path = source_path / outfile
raw_data.to_hdf(hdf5_path, key="raw_data", format="table")