Some simple tools for working with parsed Sensospot data.
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import pathlib
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import tempfile
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import nox
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@nox.session(python=["3.9", "3.10", "3.11"])
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def tests(session):
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session.install(".[test]")
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session.run("pytest", *session.posargs)
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@nox.session(python=["3.10", "3.11"])
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@nox.parametrize(
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("repo", "test_dir"),
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[
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("https://git.sgbio.de/Safeguard/mbp_hyb_calls", "tests"),
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],
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)
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def downstream(session, repo, test_dir):
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session.install(".")
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with tempfile.TemporaryDirectory() as tmpdir:
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session.run("git", "clone", repo, tmpdir, external=True)
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session.install(f"{tmpdir}[test]")
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test_path = pathlib.Path(tmpdir) / test_dir
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session.run("pytest", test_path)
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