Holger Frey
|
6c749e0843
|
finally separate flake8 config file removed
|
2 years ago |
|
Holger Frey
|
efc1f2a043
|
removing .flake8 again for testing new precommit setup
|
2 years ago |
|
Holger Frey
|
dd04b0ece6
|
python3 -m venv --prompt sensospot .venv
.venv/bin/pip3 install --upgrade pip
Requirement already satisfied: pip in ./.venv/lib/python3.10/site-packages (22.2.2)
.venv/bin/pip3 install "flit>3.2"
Requirement already satisfied: flit>3.2 in ./.venv/lib/python3.10/site-packages (3.7.1)
Requirement already satisfied: docutils in ./.venv/lib/python3.10/site-packages (from flit>3.2) (0.19)
Requirement already satisfied: requests in ./.venv/lib/python3.10/site-packages (from flit>3.2) (2.28.1)
Requirement already satisfied: tomli-w in ./.venv/lib/python3.10/site-packages (from flit>3.2) (1.0.0)
Requirement already satisfied: flit_core>=3.7.1 in ./.venv/lib/python3.10/site-packages (from flit>3.2) (3.7.1)
Requirement already satisfied: tomli in ./.venv/lib/python3.10/site-packages (from flit>3.2) (2.0.1)
Requirement already satisfied: idna<4,>=2.5 in ./.venv/lib/python3.10/site-packages (from requests->flit>3.2) (3.3)
Requirement already satisfied: certifi>=2017.4.17 in ./.venv/lib/python3.10/site-packages (from requests->flit>3.2) (2022.6.15)
Requirement already satisfied: charset-normalizer<3,>=2 in ./.venv/lib/python3.10/site-packages (from requests->flit>3.2) (2.1.1)
Requirement already satisfied: urllib3<1.27,>=1.21.1 in ./.venv/lib/python3.10/site-packages (from requests->flit>3.2) (1.26.12)
.venv/bin/flit install --pth-file
[?1049h[1;28r(B[m[4l[?7h[28;1H[?1049l
[?1l>Requirement already satisfied: pandas>=1.0.0 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 1)) (1.4.3)
Requirement already satisfied: defusedxml>=0.6.0 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 2)) (0.7.1)
Requirement already satisfied: tables>=3.6.1 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 3)) (3.7.0)
Requirement already satisfied: click in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 4)) (8.1.3)
Requirement already satisfied: pytest>=4.0.0 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (7.1.2)
Requirement already satisfied: pytest-cov in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 6)) (3.0.0)
Requirement already satisfied: pytest-mock in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 7)) (3.8.2)
Requirement already satisfied: pytest-randomly>=3.5.0 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 8)) (3.12.0)
Requirement already satisfied: tox in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (3.25.1)
Requirement already satisfied: black in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 10)) (22.6.0)
Requirement already satisfied: flake8 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 11)) (5.0.4)
Requirement already satisfied: flake8-comprehensions in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 12)) (3.10.0)
Requirement already satisfied: flake8-bandit in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (4.1.1)
Requirement already satisfied: isort>=5.0.0 in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 14)) (5.10.1)
Requirement already satisfied: keyring in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 15)) (23.8.2)
Requirement already satisfied: pre-commit in ./.venv/lib/python3.10/site-packages (from -r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (2.20.0)
Requirement already satisfied: python-dateutil>=2.8.1 in ./.venv/lib/python3.10/site-packages (from pandas>=1.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 1)) (2.8.2)
Requirement already satisfied: pytz>=2020.1 in ./.venv/lib/python3.10/site-packages (from pandas>=1.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 1)) (2022.2.1)
Requirement already satisfied: numpy>=1.21.0 in ./.venv/lib/python3.10/site-packages (from pandas>=1.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 1)) (1.23.2)
Requirement already satisfied: numexpr>=2.6.2 in ./.venv/lib/python3.10/site-packages (from tables>=3.6.1->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 3)) (2.8.3)
Requirement already satisfied: packaging in ./.venv/lib/python3.10/site-packages (from tables>=3.6.1->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 3)) (21.3)
Requirement already satisfied: tomli>=1.0.0 in ./.venv/lib/python3.10/site-packages (from pytest>=4.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (2.0.1)
Requirement already satisfied: attrs>=19.2.0 in ./.venv/lib/python3.10/site-packages (from pytest>=4.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (22.1.0)
Requirement already satisfied: pluggy<2.0,>=0.12 in ./.venv/lib/python3.10/site-packages (from pytest>=4.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (1.0.0)
Requirement already satisfied: iniconfig in ./.venv/lib/python3.10/site-packages (from pytest>=4.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (1.1.1)
Requirement already satisfied: py>=1.8.2 in ./.venv/lib/python3.10/site-packages (from pytest>=4.0.0->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 5)) (1.11.0)
Requirement already satisfied: coverage[toml]>=5.2.1 in ./.venv/lib/python3.10/site-packages (from pytest-cov->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 6)) (6.4.4)
Requirement already satisfied: toml>=0.9.4 in ./.venv/lib/python3.10/site-packages (from tox->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (0.10.2)
Requirement already satisfied: filelock>=3.0.0 in ./.venv/lib/python3.10/site-packages (from tox->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (3.8.0)
Requirement already satisfied: virtualenv!=20.0.0,!=20.0.1,!=20.0.2,!=20.0.3,!=20.0.4,!=20.0.5,!=20.0.6,!=20.0.7,>=16.0.0 in ./.venv/lib/python3.10/site-packages (from tox->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (20.16.3)
Requirement already satisfied: six>=1.14.0 in ./.venv/lib/python3.10/site-packages (from tox->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (1.16.0)
Requirement already satisfied: mypy-extensions>=0.4.3 in ./.venv/lib/python3.10/site-packages (from black->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 10)) (0.4.3)
Requirement already satisfied: platformdirs>=2 in ./.venv/lib/python3.10/site-packages (from black->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 10)) (2.5.2)
Requirement already satisfied: pathspec>=0.9.0 in ./.venv/lib/python3.10/site-packages (from black->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 10)) (0.9.0)
Requirement already satisfied: mccabe<0.8.0,>=0.7.0 in ./.venv/lib/python3.10/site-packages (from flake8->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 11)) (0.7.0)
Requirement already satisfied: pyflakes<2.6.0,>=2.5.0 in ./.venv/lib/python3.10/site-packages (from flake8->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 11)) (2.5.0)
Requirement already satisfied: pycodestyle<2.10.0,>=2.9.0 in ./.venv/lib/python3.10/site-packages (from flake8->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 11)) (2.9.1)
Requirement already satisfied: bandit>=1.7.3 in ./.venv/lib/python3.10/site-packages (from flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (1.7.4)
Requirement already satisfied: identify>=1.0.0 in ./.venv/lib/python3.10/site-packages (from pre-commit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (2.5.3)
Requirement already satisfied: pyyaml>=5.1 in ./.venv/lib/python3.10/site-packages (from pre-commit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (6.0)
Requirement already satisfied: nodeenv>=0.11.1 in ./.venv/lib/python3.10/site-packages (from pre-commit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (1.7.0)
Requirement already satisfied: cfgv>=2.0.0 in ./.venv/lib/python3.10/site-packages (from pre-commit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (3.3.1)
Requirement already satisfied: stevedore>=1.20.0 in ./.venv/lib/python3.10/site-packages (from bandit>=1.7.3->flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (4.0.0)
Requirement already satisfied: GitPython>=1.0.1 in ./.venv/lib/python3.10/site-packages (from bandit>=1.7.3->flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (3.1.27)
Requirement already satisfied: setuptools in ./.venv/lib/python3.10/site-packages (from nodeenv>=0.11.1->pre-commit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 16)) (58.1.0)
Requirement already satisfied: pyparsing!=3.0.5,>=2.0.2 in ./.venv/lib/python3.10/site-packages (from packaging->tables>=3.6.1->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 3)) (3.0.9)
Requirement already satisfied: distlib<1,>=0.3.5 in ./.venv/lib/python3.10/site-packages (from virtualenv!=20.0.0,!=20.0.1,!=20.0.2,!=20.0.3,!=20.0.4,!=20.0.5,!=20.0.6,!=20.0.7,>=16.0.0->tox->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 9)) (0.3.6)
Requirement already satisfied: gitdb<5,>=4.0.1 in ./.venv/lib/python3.10/site-packages (from GitPython>=1.0.1->bandit>=1.7.3->flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (4.0.9)
Requirement already satisfied: pbr!=2.1.0,>=2.0.0 in ./.venv/lib/python3.10/site-packages (from stevedore>=1.20.0->bandit>=1.7.3->flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (5.10.0)
Requirement already satisfied: smmap<6,>=3.0.1 in ./.venv/lib/python3.10/site-packages (from gitdb<5,>=4.0.1->GitPython>=1.0.1->bandit>=1.7.3->flake8-bandit->-r /var/folders/v5/ws7wg4wx6k76gx3t_ylh29lr0000gn/T/tmpk7adulvkrequirements.txt (line 13)) (5.0.0)
.venv/bin/pre-commit install --install-hooks
pre-commit installed at .git/hooks/pre-commit now installs also pre-commit hooks
|
2 years ago |
|
Holger Frey
|
da42f2358c
|
fixes for new findings of flake8
|
2 years ago |
|
Holger Frey
|
4e1d92ca41
|
modernized project layout and infrastructure
- bumped version to 0.8.0
- requires now at least Python 3.9
- tox tests run in Python verions 3.9 and 3.10
- moved package source to "src" directory
|
2 years ago |
 Holger Frey
|
614a031217
|
updated readme
|
3 years ago |
|
Holger Frey
|
fde3513809
|
renamed package to 'sensospot_parser'
|
3 years ago |
|
Holger Frey
|
4c69ef457b
|
added type hints and more docs to parser
|
3 years ago |
|
Holger Frey
|
79f2f0e3b9
|
added more documentation
|
3 years ago |
|
Holger Frey
|
81db693157
|
added typing information to module parameters
|
3 years ago |
|
Holger Frey
|
64cee96485
|
simplified adding parsed parameters
|
3 years ago |
|
Holger Frey
|
b86971cd5a
|
made the api import test nicer
|
3 years ago |
|
Holger Frey
|
04b2c8b598
|
renamed test for package api
|
3 years ago |
|
Holger Frey
|
38224770ad
|
renamed column constants
|
3 years ago |
|
Holger Frey
|
1fa3c65d50
|
clarified column sets
|
3 years ago |
|
Holger Frey
|
e165648123
|
added common index columns sets
|
3 years ago |
|
Holger Frey
|
4fbb6410b3
|
cosmetic changes
|
3 years ago |
|
Holger Frey
|
c7e8c3455a
|
parsing an empty folder without data raise a ValueError
|
3 years ago |
|
Holger Frey
|
6804ae5cdd
|
simplified concatenating mulitple dataframes into one
|
3 years ago |
|
Holger Frey
|
ad960108e1
|
fixed shell script name
|
3 years ago |
|
Holger Frey
|
9801036911
|
clarification in readme
|
3 years ago |
|
Holger Frey
|
6690b2fddc
|
added 'Analysis.Filename' to readme
|
3 years ago |
|
Holger Frey
|
c03cff6ad4
|
added option to recurse one level down
|
3 years ago |
|
Holger Frey
|
c1f1e2bb0e
|
added the possibility to redirect parsed data to stdout
|
3 years ago |
|
Holger Frey
|
75ac4740a5
|
fixed sanity check
|
3 years ago |
|
Holger Frey
|
e90d3367ea
|
removed unused column definitions
|
3 years ago |
|
Holger Frey
|
2de4859ca8
|
removed typo
|
3 years ago |
|
Holger Frey
|
0290c0a9ba
|
removed "utils" and "dynamic_range"
this two modules should be added to a new project. This project should concentrate on on just parsing the data.
|
3 years ago |
|
Holger Frey
|
994a06a8f3
|
added more tests for apply_map()
|
3 years ago |
|
Holger Frey
|
df0bf78b29
|
added apply_map() api function to readme
|
3 years ago |
|
Holger Frey
|
791bc51deb
|
linted
|
3 years ago |
|
Holger Frey
|
9359cc00af
|
added api function apply_map
this also lead to simplifications in _add_measurement_params and apply_exposure_map
|
3 years ago |
|
Holger Frey
|
ab3fb1e040
|
fixed changelog
|
3 years ago |
|
Holger Frey
|
6ee257bc1e
|
changed name of RAW_DATA_COLUMN_SET to PARSED_DATA_COLUMN_SET
|
3 years ago |
|
Holger Frey
|
71ad6c7977
|
bumped version
|
3 years ago |
|
Holger Frey
|
2274a2101b
|
changed defaults for xdr since sensospot bug is fixed
|
3 years ago |
|
Holger Frey
|
dc8851d40e
|
removed aggregate utils, they don't belong in this library
|
3 years ago |
|
Holger Frey
|
430ed5c8ca
|
added --quite flag to cli to bypass sanity checks
|
3 years ago |
|
Holger Frey
|
d6f0116916
|
added sanity check when creating an xdr data frame
|
3 years ago |
|
Holger Frey
|
9be13db61c
|
fixed naming for test spot overflow
|
4 years ago |
|
Holger Frey
|
dc8e7d5273
|
changed 'split_data_frame' to 'split'
|
4 years ago |
|
Holger Frey
|
d6dac702e7
|
normalize_values() will respect preset exposure time
|
4 years ago |
|
Holger Frey
|
ce93150e19
|
changed naming of default aggregation index columns
|
4 years ago |
|
Holger Frey
|
6a00ac943d
|
added aggregation utility methods
|
4 years ago |
|
Holger Frey
|
0e605c4943
|
swapped pytest random plugin to a more activly supported one
|
4 years ago |
|
Holger Frey
|
d282dadcfa
|
pushed version to 0.5.0
|
4 years ago |
|
Holger Frey
|
d32d1b857e
|
updated readme
|
4 years ago |
|
Holger Frey
|
fc56380e24
|
renamed cli command to parse_sensospot_data
|
4 years ago |
|
Holger Frey
|
2ad90af448
|
removed get_meaurement_params from public api
|
4 years ago |
|
Holger Frey
|
d6561c5ca1
|
renamed parameters in create_xdr
|
4 years ago |
