Added parser for assay results XML file

Conversation 0 Commits 11 Files Changed 494

Author	SHA1	Message	Date
Holger Frey	8169daeb89	Added parser for the assay results xml file The `sensospot_parser.parse_folder()` function now tries to parse the xml file first and will fall back to parsing csv files if an error occurs	4 years ago
Holger Frey	0a1da70021	added more example data for comparing xml to csv parsing	4 years ago
Holger Frey	9de0a09557	added more example xml data for testing	4 years ago
Holger Frey	819358977e	fixed test data for upcoming module xml_parser	4 years ago
Holger Frey	dd476bb19a	added more calls to "clenup_data_columns()" to remove double index columns after merges	4 years ago
Holger Frey	8c591e9f3c	removed debug print statement	4 years ago
Holger Frey	988c7562d9	renamed some functions in "csv_parser" module to have more explicit names	4 years ago
Holger Frey	8644a25d78	moved _cleanup_data_columns() function to "columns" module by moving this function it can be easily reused in the upcoming "xml_parser" module	4 years ago
Holger Frey	99d0e0fa4e	renamed test cases and added a new one for xml parsing	4 years ago
Holger Frey	938b063069	removed the "recordtime" module The "recordtime" module uses the assay result xml file for retrieving the Analyses.Datetime value. This value is only available in the assay result xml. Since the "parse_csv" module will only be a backup if this xml file is not present, a separate parser for the Analysis.Datetime is not needed anymore	4 years ago
Holger Frey	873091504c	renamed the "parser" module to "csv_parser" The "csv_parser" module will be used as a backup if the analysis xml file is not present.	4 years ago

Added parser for assay results XML file #1

11 Commits